Prerequisites

Note: You need to install these tools if they are not available from your computer.

• Python 3
• R
• R library GSVA (only required by gComposite.py)

Python dependencies

• pandas
• numpy
• scipy
• sklearn

Note

You do NOT need to install these packages manually, as they will be automatically installed if you use pip3.

Install

$ pip3 install epage
or
$ pip3 install git+https://github.com/liguowang/epage.git

Upgrade

$ pip3 install epage --upgrade